Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Gm22189-201ENSMUST00000103822 86 ntBASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Gm42612-201ENSMUST00000197986 623 ntBASIC14.2□□□□□ -0.14
Vps28Q9D1C8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Gm43170-201ENSMUST00000199827 612 ntBASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps28Q9D1C8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps28Q9D1C8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Gm12859-201ENSMUST00000117834 427 ntBASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms