Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Gm42997-202ENSMUST00000200321 985 ntBASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Gm20426-201ENSMUST00000173657 440 ntBASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh15Q99PJ1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Gm24749-201ENSMUST00000157838 343 ntBASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Gm7593-201ENSMUST00000187246 644 ntBASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Gm44405-201ENSMUST00000198952 126 ntBASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Gm9555-201ENSMUST00000200908 583 ntBASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Gm18393-201ENSMUST00000208349 1131 ntBASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.29■□□□□ 0.04
Pcdh15Q99PJ1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Gm13875-201ENSMUST00000120162 282 ntBASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms