Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 AC153801.1-201ENSMUST00000217904 947 ntBASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 AC153532.1-201ENSMUST00000218126 1111 ntBASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 AC117949.2-201ENSMUST00000225900 584 ntBASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Rps25-201ENSMUST00000080300 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Gm15595-201ENSMUST00000120840 961 ntBASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Gm43997-201ENSMUST00000203986 1005 ntBASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Gm7775-201ENSMUST00000218871 853 ntBASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 AC116724.1-201ENSMUST00000227900 972 ntBASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb20Q91XZ9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb20Q91XZ9 Gm7961-201ENSMUST00000201338 1436 ntBASIC13.71□□□□□ -0.22
Pcdhb20Q91XZ9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb20Q91XZ9 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb20Q91XZ9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Pcdhb20Q91XZ9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb20Q91XZ9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb20Q91XZ9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb20Q91XZ9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb20Q91XZ9 Gm42736-201ENSMUST00000200723 1353 ntBASIC13.71□□□□□ -0.22
Pcdhb20Q91XZ9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Gm12428-201ENSMUST00000119844 727 ntBASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Gm42452-201ENSMUST00000199749 617 ntBASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Gm45733-201ENSMUST00000212988 437 ntBASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb20Q91XZ9 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms