Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sf3a1Q8K4Z5 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.96■□□□□ 0.3
Sf3a1Q8K4Z5 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sf3a1Q8K4Z5 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sf3a1Q8K4Z5 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.3
Sf3a1Q8K4Z5 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Sf3a1Q8K4Z5 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Gm13385-201ENSMUST00000121089 220 ntBASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3a1Q8K4Z5 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Gm6912-201ENSMUST00000117218 544 ntBASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Gm2445-201ENSMUST00000182798 989 ntBASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Mir6977-201ENSMUST00000184960 64 ntBASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.94■□□□□ 0.3
Sf3a1Q8K4Z5 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Sf3a1Q8K4Z5 Gm27437-201ENSMUST00000183429 107 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms