Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf4Q8K4J2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Rubie-203ENSMUST00000227803 2430 ntBASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf4Q8K4J2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Gm11764-201ENSMUST00000120221 623 ntBASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf4Q8K4J2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Syt7-205ENSMUST00000224135 1557 ntBASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Gm25990-201ENSMUST00000102440 86 ntBASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf4Q8K4J2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms