Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Gm15236-201ENSMUST00000117309 379 ntBASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Gm43118-201ENSMUST00000199149 775 ntBASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Gm18473-201ENSMUST00000220543 868 ntBASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Gm15371-201ENSMUST00000117057 784 ntBASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Gm12203-201ENSMUST00000118235 598 ntBASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Gm12209-201ENSMUST00000120089 596 ntBASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Gm1335-201ENSMUST00000121653 386 ntBASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Gm7783-201ENSMUST00000204795 781 ntBASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Gm17823-201ENSMUST00000217830 1006 ntBASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Shtn1Q8K2Q9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shtn1Q8K2Q9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shtn1Q8K2Q9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.27■□□□□ 0.19
Shtn1Q8K2Q9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shtn1Q8K2Q9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Shtn1Q8K2Q9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shtn1Q8K2Q9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Shtn1Q8K2Q9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Gm27772-201ENSMUST00000184900 187 ntBASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Gm37008-201ENSMUST00000195712 319 ntBASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Gm12846-201ENSMUST00000120431 1373 ntBASIC16.26■□□□□ 0.19
Shtn1Q8K2Q9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Shtn1Q8K2Q9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms