Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Mir698-201ENSMUST00000102164 109 ntBASIC17.13■□□□□ 0.33
Smc5Q8CG46 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Gm9824-201ENSMUST00000178707 561 ntBASIC17.13■□□□□ 0.33
Smc5Q8CG46 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Gm27525-201ENSMUST00000184465 107 ntBASIC17.13■□□□□ 0.33
Smc5Q8CG46 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.13■□□□□ 0.33
Smc5Q8CG46 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.13■□□□□ 0.33
Smc5Q8CG46 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.13■□□□□ 0.33
Smc5Q8CG46 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.13■□□□□ 0.33
Smc5Q8CG46 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Smc5Q8CG46 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Smc5Q8CG46 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc5Q8CG46 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc5Q8CG46 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smc5Q8CG46 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc5Q8CG46 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.12■□□□□ 0.33
Smc5Q8CG46 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc5Q8CG46 Mir6990-201ENSMUST00000183724 91 ntBASIC17.12■□□□□ 0.33
Smc5Q8CG46 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc5Q8CG46 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Smc5Q8CG46 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.12■□□□□ 0.33
Smc5Q8CG46 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc5Q8CG46 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc5Q8CG46 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc5Q8CG46 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smc5Q8CG46 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smc5Q8CG46 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc5Q8CG46 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc5Q8CG46 Gm43134-201ENSMUST00000199434 1886 ntBASIC17.12■□□□□ 0.33
Smc5Q8CG46 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.12■□□□□ 0.33
Smc5Q8CG46 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc5Q8CG46 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.11■□□□□ 0.33
Smc5Q8CG46 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Smc5Q8CG46 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc5Q8CG46 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc5Q8CG46 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc5Q8CG46 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc5Q8CG46 Mir1895-201ENSMUST00000122615 79 ntBASIC17.11■□□□□ 0.33
Smc5Q8CG46 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc5Q8CG46 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
Smc5Q8CG46 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Smc5Q8CG46 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc5Q8CG46 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc5Q8CG46 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc5Q8CG46 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.11■□□□□ 0.33
Smc5Q8CG46 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc5Q8CG46 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc5Q8CG46 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc5Q8CG46 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Smc5Q8CG46 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.1■□□□□ 0.33
Smc5Q8CG46 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Smc5Q8CG46 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms