Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Polr2bQ8CFI7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Gm5425-201ENSMUST00000214125 459 ntBASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Polr2bQ8CFI7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Gm12859-201ENSMUST00000117834 427 ntBASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Gm13385-201ENSMUST00000121089 220 ntBASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Gm29741-201ENSMUST00000192667 421 ntBASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Gm17795-201ENSMUST00000214505 757 ntBASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.87□□□□□ -0.03
Polr2bQ8CFI7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Polr2bQ8CFI7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Polr2bQ8CFI7 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.86□□□□□ -0.03
Polr2bQ8CFI7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Polr2bQ8CFI7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Polr2bQ8CFI7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Polr2bQ8CFI7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Polr2bQ8CFI7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.86□□□□□ -0.03
Polr2bQ8CFI7 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.86□□□□□ -0.03
Polr2bQ8CFI7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms