Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc38Q8CDN8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.43■□□□□ 0.06
Ccdc38Q8CDN8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc38Q8CDN8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc38Q8CDN8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc38Q8CDN8 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc38Q8CDN8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc38Q8CDN8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc38Q8CDN8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc38Q8CDN8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc38Q8CDN8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc38Q8CDN8 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Gm5312-201ENSMUST00000203728 547 ntBASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ccdc38Q8CDN8 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Mir449b-201ENSMUST00000104833 80 ntBASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc38Q8CDN8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Gm6415-201ENSMUST00000118488 348 ntBASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Gm2213-201ENSMUST00000197485 688 ntBASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Gm7774-201ENSMUST00000200064 533 ntBASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc38Q8CDN8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms