Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Gm5566-201ENSMUST00000116118 459 ntBASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Gm27631-201ENSMUST00000184163 466 ntBASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Gm29541-201ENSMUST00000191351 678 ntBASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vcpip1Q8CDG3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Gm18766-201ENSMUST00000189811 808 ntBASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Gm43474-201ENSMUST00000196415 774 ntBASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vcpip1Q8CDG3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Gm25948-201ENSMUST00000175334 112 ntBASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vcpip1Q8CDG3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms