Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Gm15460-201ENSMUST00000118147 391 ntBASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Sh3rf3Q8C120 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sh3rf3Q8C120 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Sh3rf3Q8C120 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sh3rf3Q8C120 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Sh3rf3Q8C120 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.46□□□□□ -0.1
Sh3rf3Q8C120 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sh3rf3Q8C120 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sh3rf3Q8C120 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sh3rf3Q8C120 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Gm15653-201ENSMUST00000119247 907 ntBASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Sh3rf3Q8C120 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Gm9229-201ENSMUST00000222777 126 ntBASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Mir497b-201ENSMUST00000093601 125 ntBASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf3Q8C120 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Gm13453-201ENSMUST00000118708 357 ntBASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sh3rf3Q8C120 Gm27680-201ENSMUST00000184192 160 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms