Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ubr7Q8BU04 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ubr7Q8BU04 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ubr7Q8BU04 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ubr7Q8BU04 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.95□□□□□ -0.18
Ubr7Q8BU04 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ubr7Q8BU04 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Gm15806-201ENSMUST00000120696 955 ntBASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.94□□□□□ -0.18
Ubr7Q8BU04 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Gm44719-201ENSMUST00000206404 149 ntBASIC13.94□□□□□ -0.18
Ubr7Q8BU04 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ubr7Q8BU04 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Gm11478-201ENSMUST00000117851 599 ntBASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Gm15429-201ENSMUST00000151268 798 ntBASIC13.93□□□□□ -0.18
Ubr7Q8BU04 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.93□□□□□ -0.18
Ubr7Q8BU04 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ubr7Q8BU04 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms