Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 AA543401-201ENSMUST00000164248 1269 ntBASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Gm43125-201ENSMUST00000201724 730 ntBASIC13.4□□□□□ -0.26
Cpne3Q8BT60 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cpne3Q8BT60 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.4□□□□□ -0.27
Cpne3Q8BT60 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cpne3Q8BT60 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Gm9824-201ENSMUST00000178707 561 ntBASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.39□□□□□ -0.27
Cpne3Q8BT60 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Cpne3Q8BT60 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Gm13015-201ENSMUST00000118674 204 ntBASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Mir6990-201ENSMUST00000183724 91 ntBASIC13.38□□□□□ -0.27
Cpne3Q8BT60 AA619741-201ENSMUST00000195095 646 ntBASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms