Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smg1Q8BKX6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smg1Q8BKX6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smg1Q8BKX6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Smg1Q8BKX6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smg1Q8BKX6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smg1Q8BKX6 Acot6-202ENSMUST00000222921 3622 ntBASIC11.46□□□□□ -0.58
Smg1Q8BKX6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smg1Q8BKX6 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.46□□□□□ -0.58
Smg1Q8BKX6 Gm13123-201ENSMUST00000122173 492 ntBASIC11.46□□□□□ -0.58
Smg1Q8BKX6 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Smg1Q8BKX6 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.46□□□□□ -0.58
Smg1Q8BKX6 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.46□□□□□ -0.58
Smg1Q8BKX6 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smg1Q8BKX6 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smg1Q8BKX6 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.46□□□□□ -0.58
Smg1Q8BKX6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smg1Q8BKX6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smg1Q8BKX6 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Gm13385-201ENSMUST00000121089 220 ntBASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Gm13097-201ENSMUST00000210722 397 ntBASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.45□□□□□ -0.58
Smg1Q8BKX6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.44□□□□□ -0.58
Smg1Q8BKX6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.44□□□□□ -0.58
Smg1Q8BKX6 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.44□□□□□ -0.58
Smg1Q8BKX6 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Gm11597-201ENSMUST00000121423 964 ntBASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Gm23699-201ENSMUST00000158835 135 ntBASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Mospd4-201ENSMUST00000180618 576 ntBASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smg1Q8BKX6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smg1Q8BKX6 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms