Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc5a7Q8BGY9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc5a7Q8BGY9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc5a7Q8BGY9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slc5a7Q8BGY9 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.14□□□□□ -0.47
Slc5a7Q8BGY9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc5a7Q8BGY9 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc5a7Q8BGY9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc5a7Q8BGY9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Slc5a7Q8BGY9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc5a7Q8BGY9 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Gm6550-201ENSMUST00000187574 993 ntBASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Slc5a7Q8BGY9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Slc5a7Q8BGY9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc5a7Q8BGY9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Slc5a7Q8BGY9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc5a7Q8BGY9 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Slc5a7Q8BGY9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc5a7Q8BGY9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc5a7Q8BGY9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc5a7Q8BGY9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Slc5a7Q8BGY9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc5a7Q8BGY9 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc5a7Q8BGY9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc5a7Q8BGY9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc5a7Q8BGY9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc5a7Q8BGY9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Slc5a7Q8BGY9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Slc5a7Q8BGY9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms