Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Gm9856-201ENSMUST00000217077 2578 ntBASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Gm37736-201ENSMUST00000193564 2802 ntBASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Gm29127-201ENSMUST00000188304 517 ntBASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Gm27572-201ENSMUST00000183702 255 ntBASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Gm45930-201ENSMUST00000221330 292 ntBASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Syne1Q6ZWR6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gm16177-201ENSMUST00000120728 718 ntBASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gm6944-201ENSMUST00000182449 1006 ntBASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Mir125a-201ENSMUST00000083545 68 ntBASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gm37812-201ENSMUST00000195216 2475 ntBASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gm13689-201ENSMUST00000119360 685 ntBASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Gm15823-201ENSMUST00000064305 670 ntBASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Syne1Q6ZWR6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms