Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ctr9Q62018 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Ctr9Q62018 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ctr9Q62018 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.34■□□□□ 0.21
Ctr9Q62018 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.34■□□□□ 0.21
Ctr9Q62018 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.34■□□□□ 0.21
Ctr9Q62018 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ctr9Q62018 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ctr9Q62018 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.34■□□□□ 0.21
Ctr9Q62018 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ctr9Q62018 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ctr9Q62018 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ctr9Q62018 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ctr9Q62018 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.34■□□□□ 0.21
Ctr9Q62018 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ctr9Q62018 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ctr9Q62018 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.34■□□□□ 0.21
Ctr9Q62018 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ctr9Q62018 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ctr9Q62018 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ctr9Q62018 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Ctr9Q62018 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ctr9Q62018 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.33■□□□□ 0.21
Ctr9Q62018 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Ctr9Q62018 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ctr9Q62018 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.33■□□□□ 0.2
Ctr9Q62018 Gm24420-201ENSMUST00000176676 59 ntBASIC16.33■□□□□ 0.2
Ctr9Q62018 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.33■□□□□ 0.2
Ctr9Q62018 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ctr9Q62018 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ctr9Q62018 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.33■□□□□ 0.2
Ctr9Q62018 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Ctr9Q62018 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ctr9Q62018 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ctr9Q62018 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ctr9Q62018 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ctr9Q62018 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ctr9Q62018 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ctr9Q62018 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ctr9Q62018 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ctr9Q62018 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ctr9Q62018 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.32■□□□□ 0.2
Ctr9Q62018 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.32■□□□□ 0.2
Ctr9Q62018 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ctr9Q62018 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.32■□□□□ 0.2
Ctr9Q62018 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Ctr9Q62018 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ctr9Q62018 Gm43094-201ENSMUST00000196549 921 ntBASIC16.32■□□□□ 0.2
Ctr9Q62018 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.32■□□□□ 0.2
Ctr9Q62018 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.32■□□□□ 0.2
Ctr9Q62018 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ctr9Q62018 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ctr9Q62018 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ctr9Q62018 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ctr9Q62018 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.31■□□□□ 0.2
Ctr9Q62018 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ctr9Q62018 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ctr9Q62018 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Mir698-201ENSMUST00000102164 109 ntBASIC16.31■□□□□ 0.2
Ctr9Q62018 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.31■□□□□ 0.2
Ctr9Q62018 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.31■□□□□ 0.2
Ctr9Q62018 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ctr9Q62018 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ctr9Q62018 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctr9Q62018 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.3■□□□□ 0.2
Ctr9Q62018 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms