Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a4Q60857 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Slc6a4Q60857 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.17□□□□□ -0.14
Slc6a4Q60857 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a4Q60857 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a4Q60857 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Gm13689-201ENSMUST00000119360 685 ntBASIC14.16□□□□□ -0.14
Slc6a4Q60857 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Slc6a4Q60857 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.15□□□□□ -0.14
Slc6a4Q60857 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.15□□□□□ -0.14
Slc6a4Q60857 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a4Q60857 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Slc6a4Q60857 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.14□□□□□ -0.15
Slc6a4Q60857 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Gm15806-201ENSMUST00000120696 955 ntBASIC14.14□□□□□ -0.15
Slc6a4Q60857 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.14□□□□□ -0.15
Slc6a4Q60857 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.14□□□□□ -0.15
Slc6a4Q60857 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Gm2495-201ENSMUST00000191160 466 ntBASIC14.14□□□□□ -0.15
Slc6a4Q60857 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a4Q60857 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms