Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Gm13829-201ENSMUST00000119600 138 ntBASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Mir1894-201ENSMUST00000122802 81 ntBASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Gm5161-201ENSMUST00000075243 853 ntBASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Gm25857-201ENSMUST00000082788 129 ntBASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Gm24447-201ENSMUST00000083977 338 ntBASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38aQ4FK66 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Prpf38aQ4FK66 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Gm12928-201ENSMUST00000117115 573 ntBASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Gm2445-201ENSMUST00000182798 989 ntBASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Gm17794-201ENSMUST00000220252 955 ntBASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Prpf38aQ4FK66 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Gm38223-201ENSMUST00000194484 695 ntBASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Prpf38aQ4FK66 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Prpf38aQ4FK66 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms