Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccbe1Q3MI99 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccbe1Q3MI99 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Mir8098-201ENSMUST00000184011 137 ntBASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccbe1Q3MI99 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Gm12895-201ENSMUST00000122214 226 ntBASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Ccbe1Q3MI99 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccbe1Q3MI99 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms