Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd8Q09XV5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chd8Q09XV5 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chd8Q09XV5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.26□□□□□ -0.45
Chd8Q09XV5 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.26□□□□□ -0.45
Chd8Q09XV5 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Gm44651-201ENSMUST00000207343 372 ntBASIC12.26□□□□□ -0.45
Chd8Q09XV5 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.26□□□□□ -0.45
Chd8Q09XV5 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.26□□□□□ -0.45
Chd8Q09XV5 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Gm24749-201ENSMUST00000157838 343 ntBASIC12.26□□□□□ -0.45
Chd8Q09XV5 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Gm42511-201ENSMUST00000196160 234 ntBASIC12.26□□□□□ -0.45
Chd8Q09XV5 Gm5298-201ENSMUST00000201122 892 ntBASIC12.26□□□□□ -0.45
Chd8Q09XV5 Gm19287-201ENSMUST00000203190 358 ntBASIC12.26□□□□□ -0.45
Chd8Q09XV5 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Gm25201-201ENSMUST00000083093 170 ntBASIC12.26□□□□□ -0.45
Chd8Q09XV5 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.26□□□□□ -0.45
Chd8Q09XV5 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Celf4-206ENSMUST00000224553 1729 ntBASIC12.26□□□□□ -0.45
Chd8Q09XV5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chd8Q09XV5 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm14034-201ENSMUST00000120147 551 ntBASIC12.25□□□□□ -0.45
Chd8Q09XV5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm9555-201ENSMUST00000200908 583 ntBASIC12.25□□□□□ -0.45
Chd8Q09XV5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm3793-201ENSMUST00000204973 672 ntBASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm10076-201ENSMUST00000073238 384 ntBASIC12.25□□□□□ -0.45
Chd8Q09XV5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.25□□□□□ -0.45
Chd8Q09XV5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm45500-201ENSMUST00000211676 803 ntBASIC12.25□□□□□ -0.45
Chd8Q09XV5 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm19163-201ENSMUST00000223313 780 ntBASIC12.25□□□□□ -0.45
Chd8Q09XV5 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.25□□□□□ -0.45
Chd8Q09XV5 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.25□□□□□ -0.45
Chd8Q09XV5 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm15432-201ENSMUST00000121106 195 ntBASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm4868-201ENSMUST00000164138 789 ntBASIC12.25□□□□□ -0.45
Chd8Q09XV5 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.25□□□□□ -0.45
Chd8Q09XV5 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.25□□□□□ -0.45
Chd8Q09XV5 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chd8Q09XV5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chd8Q09XV5 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms