Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.04□□□□□ -0.16
Ebf1Q07802 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ebf1Q07802 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf1Q07802 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Gm12390-201ENSMUST00000117897 397 ntBASIC14.03□□□□□ -0.16
Ebf1Q07802 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.03□□□□□ -0.16
Ebf1Q07802 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Mir6420-201ENSMUST00000185032 102 ntBASIC14.03□□□□□ -0.16
Ebf1Q07802 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.03□□□□□ -0.16
Ebf1Q07802 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ebf1Q07802 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.03□□□□□ -0.16
Ebf1Q07802 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.03□□□□□ -0.16
Ebf1Q07802 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.03□□□□□ -0.16
Ebf1Q07802 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ebf1Q07802 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf1Q07802 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf1Q07802 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ebf1Q07802 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf1Q07802 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf1Q07802 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf1Q07802 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf1Q07802 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ebf1Q07802 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.02□□□□□ -0.17
Ebf1Q07802 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.02□□□□□ -0.17
Ebf1Q07802 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf1Q07802 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ebf1Q07802 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ebf1Q07802 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf1Q07802 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf1Q07802 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf1Q07802 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.02□□□□□ -0.17
Ebf1Q07802 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf1Q07802 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf1Q07802 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.01□□□□□ -0.17
Ebf1Q07802 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ebf1Q07802 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.01□□□□□ -0.17
Ebf1Q07802 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ebf1Q07802 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.01□□□□□ -0.17
Ebf1Q07802 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Ebf1Q07802 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.01□□□□□ -0.17
Ebf1Q07802 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ebf1Q07802 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Ebf1Q07802 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ebf1Q07802 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ebf1Q07802 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf1Q07802 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Ebf1Q07802 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.01□□□□□ -0.17
Ebf1Q07802 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms