Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Mir698-201ENSMUST00000102164 109 ntBASIC13.62□□□□□ -0.23
Sox4Q06831 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Sox4Q06831 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.62□□□□□ -0.23
Sox4Q06831 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.62□□□□□ -0.23
Sox4Q06831 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.62□□□□□ -0.23
Sox4Q06831 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.62□□□□□ -0.23
Sox4Q06831 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Sox4Q06831 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.62□□□□□ -0.23
Sox4Q06831 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sox4Q06831 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Sox4Q06831 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sox4Q06831 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sox4Q06831 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.61□□□□□ -0.23
Sox4Q06831 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.61□□□□□ -0.23
Sox4Q06831 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.61□□□□□ -0.23
Sox4Q06831 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.61□□□□□ -0.23
Sox4Q06831 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Sox4Q06831 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Sox4Q06831 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.61□□□□□ -0.23
Sox4Q06831 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Gm2445-201ENSMUST00000182798 989 ntBASIC13.61□□□□□ -0.23
Sox4Q06831 Gm7063-201ENSMUST00000186840 981 ntBASIC13.61□□□□□ -0.23
Sox4Q06831 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.61□□□□□ -0.23
Sox4Q06831 Gm18905-201ENSMUST00000205454 928 ntBASIC13.61□□□□□ -0.23
Sox4Q06831 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sox4Q06831 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sox4Q06831 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sox4Q06831 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.61□□□□□ -0.23
Sox4Q06831 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Sox4Q06831 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Sox4Q06831 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.61□□□□□ -0.23
Sox4Q06831 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox4Q06831 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.6□□□□□ -0.23
Sox4Q06831 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sox4Q06831 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.6□□□□□ -0.23
Sox4Q06831 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.6□□□□□ -0.23
Sox4Q06831 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.6□□□□□ -0.23
Sox4Q06831 Gm24420-201ENSMUST00000176676 59 ntBASIC13.6□□□□□ -0.23
Sox4Q06831 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox4Q06831 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms