Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.82□□□□□ -0.2
Col6a2Q02788 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.82□□□□□ -0.2
Col6a2Q02788 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.82□□□□□ -0.2
Col6a2Q02788 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col6a2Q02788 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
Col6a2Q02788 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Col6a2Q02788 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.81□□□□□ -0.2
Col6a2Q02788 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.81□□□□□ -0.2
Col6a2Q02788 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Gm24420-201ENSMUST00000176676 59 ntBASIC13.81□□□□□ -0.2
Col6a2Q02788 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.81□□□□□ -0.2
Col6a2Q02788 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.81□□□□□ -0.2
Col6a2Q02788 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.81□□□□□ -0.2
Col6a2Q02788 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.81□□□□□ -0.2
Col6a2Q02788 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Gm45384-201ENSMUST00000210451 277 ntBASIC13.81□□□□□ -0.2
Col6a2Q02788 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.81□□□□□ -0.2
Col6a2Q02788 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.81□□□□□ -0.2
Col6a2Q02788 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.81□□□□□ -0.2
Col6a2Q02788 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.81□□□□□ -0.2
Col6a2Q02788 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col6a2Q02788 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Col6a2Q02788 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.81□□□□□ -0.2
Col6a2Q02788 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a2Q02788 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Col6a2Q02788 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col6a2Q02788 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col6a2Q02788 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col6a2Q02788 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col6a2Q02788 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col6a2Q02788 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col6a2Q02788 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col6a2Q02788 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col6a2Q02788 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.8□□□□□ -0.2
Col6a2Q02788 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.8□□□□□ -0.2
Col6a2Q02788 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.8□□□□□ -0.2
Col6a2Q02788 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.8□□□□□ -0.2
Col6a2Q02788 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.8□□□□□ -0.2
Col6a2Q02788 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col6a2Q02788 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a2Q02788 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col6a2Q02788 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a2Q02788 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms