Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Pdlim4P70271 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.57□□□□□ -0.56
Pdlim4P70271 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.57□□□□□ -0.56
Pdlim4P70271 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.57□□□□□ -0.56
Pdlim4P70271 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pdlim4P70271 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Pdlim4P70271 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Pdlim4P70271 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Pdlim4P70271 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Pdlim4P70271 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Pdlim4P70271 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.56□□□□□ -0.56
Pdlim4P70271 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pdlim4P70271 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pdlim4P70271 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Pdlim4P70271 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.56□□□□□ -0.56
Pdlim4P70271 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Gm6916-202ENSMUST00000205523 195 ntBASIC11.56□□□□□ -0.56
Pdlim4P70271 Gm44608-201ENSMUST00000206827 855 ntBASIC11.56□□□□□ -0.56
Pdlim4P70271 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.56□□□□□ -0.56
Pdlim4P70271 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.56□□□□□ -0.56
Pdlim4P70271 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pdlim4P70271 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.55□□□□□ -0.56
Pdlim4P70271 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pdlim4P70271 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.55□□□□□ -0.56
Pdlim4P70271 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Pdlim4P70271 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pdlim4P70271 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Pdlim4P70271 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.55□□□□□ -0.56
Pdlim4P70271 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.55□□□□□ -0.56
Pdlim4P70271 Gm27680-201ENSMUST00000184192 160 ntBASIC11.55□□□□□ -0.56
Pdlim4P70271 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Gm33320-201ENSMUST00000192232 530 ntBASIC11.55□□□□□ -0.56
Pdlim4P70271 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Gm9229-201ENSMUST00000222777 126 ntBASIC11.55□□□□□ -0.56
Pdlim4P70271 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Pdlim4P70271 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.55□□□□□ -0.56
Pdlim4P70271 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pdlim4P70271 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.55□□□□□ -0.56
Pdlim4P70271 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdlim4P70271 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Pdlim4P70271 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms