Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Lsm5P62322 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Lsm5P62322 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Lsm5P62322 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Gm7222-201ENSMUST00000117512 906 ntBASIC11.53□□□□□ -0.56
Lsm5P62322 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Lsm5P62322 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Lsm5P62322 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Gm6659-201ENSMUST00000174752 547 ntBASIC11.53□□□□□ -0.56
Lsm5P62322 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Lsm5P62322 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.53□□□□□ -0.56
Lsm5P62322 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.53□□□□□ -0.56
Lsm5P62322 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
Lsm5P62322 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.53□□□□□ -0.56
Lsm5P62322 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.53□□□□□ -0.56
Lsm5P62322 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.53□□□□□ -0.56
Lsm5P62322 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.53□□□□□ -0.56
Lsm5P62322 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Lsm5P62322 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.53□□□□□ -0.56
Lsm5P62322 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Lsm5P62322 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Lsm5P62322 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Lsm5P62322 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.53□□□□□ -0.56
Lsm5P62322 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Lsm5P62322 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm5P62322 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Lsm5P62322 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm5P62322 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm5P62322 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm5P62322 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm5P62322 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.52□□□□□ -0.56
Lsm5P62322 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm5P62322 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.52□□□□□ -0.56
Lsm5P62322 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm5P62322 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.52□□□□□ -0.56
Lsm5P62322 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm5P62322 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm5P62322 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Lsm5P62322 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Lsm5P62322 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Lsm5P62322 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Lsm5P62322 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.52□□□□□ -0.57
Lsm5P62322 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Lsm5P62322 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Lsm5P62322 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.52□□□□□ -0.57
Lsm5P62322 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.52□□□□□ -0.57
Lsm5P62322 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.52□□□□□ -0.57
Lsm5P62322 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Lsm5P62322 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.52□□□□□ -0.57
Lsm5P62322 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm5P62322 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.52□□□□□ -0.57
Lsm5P62322 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Lsm5P62322 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Lsm5P62322 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Lsm5P62322 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm5P62322 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms