Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.1□□□□□ -0.31
Nup43P59235 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.1□□□□□ -0.31
Nup43P59235 Gm2445-201ENSMUST00000182798 989 ntBASIC13.1□□□□□ -0.31
Nup43P59235 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.1□□□□□ -0.31
Nup43P59235 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nup43P59235 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nup43P59235 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Nup43P59235 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Nup43P59235 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.1□□□□□ -0.31
Nup43P59235 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup43P59235 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Mir698-201ENSMUST00000102164 109 ntBASIC13.09□□□□□ -0.31
Nup43P59235 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.09□□□□□ -0.31
Nup43P59235 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Nup43P59235 Gm24694-201ENSMUST00000180054 110 ntBASIC13.09□□□□□ -0.31
Nup43P59235 Gm27663-201ENSMUST00000184839 110 ntBASIC13.09□□□□□ -0.31
Nup43P59235 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup43P59235 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup43P59235 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nup43P59235 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Nup43P59235 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Nup43P59235 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
Nup43P59235 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Nup43P59235 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup43P59235 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup43P59235 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup43P59235 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Nup43P59235 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nup43P59235 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Nup43P59235 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nup43P59235 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Nup43P59235 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Gm6912-201ENSMUST00000117218 544 ntBASIC13.08□□□□□ -0.32
Nup43P59235 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Nup43P59235 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.08□□□□□ -0.32
Nup43P59235 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.08□□□□□ -0.32
Nup43P59235 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nup43P59235 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.08□□□□□ -0.32
Nup43P59235 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.08□□□□□ -0.32
Nup43P59235 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Nup43P59235 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nup43P59235 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup43P59235 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.08□□□□□ -0.32
Nup43P59235 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Nup43P59235 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.07□□□□□ -0.32
Nup43P59235 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms