Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.64□□□□□ -0.07
Shmt1P50431 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shmt1P50431 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shmt1P50431 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
Shmt1P50431 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Shmt1P50431 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shmt1P50431 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shmt1P50431 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.64□□□□□ -0.07
Shmt1P50431 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shmt1P50431 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shmt1P50431 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Shmt1P50431 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Shmt1P50431 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.63□□□□□ -0.07
Shmt1P50431 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Shmt1P50431 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.63□□□□□ -0.07
Shmt1P50431 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Gm12341-201ENSMUST00000119724 503 ntBASIC14.63□□□□□ -0.07
Shmt1P50431 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.63□□□□□ -0.07
Shmt1P50431 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.63□□□□□ -0.07
Shmt1P50431 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Shmt1P50431 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Gm8515-201ENSMUST00000194852 576 ntBASIC14.63□□□□□ -0.07
Shmt1P50431 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.63□□□□□ -0.07
Shmt1P50431 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Gm15823-201ENSMUST00000064305 670 ntBASIC14.63□□□□□ -0.07
Shmt1P50431 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.63□□□□□ -0.07
Shmt1P50431 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.63□□□□□ -0.07
Shmt1P50431 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Shmt1P50431 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.63□□□□□ -0.07
Shmt1P50431 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.63□□□□□ -0.07
Shmt1P50431 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.63□□□□□ -0.07
Shmt1P50431 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Shmt1P50431 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shmt1P50431 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Shmt1P50431 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Shmt1P50431 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Shmt1P50431 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.62□□□□□ -0.07
Shmt1P50431 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.62□□□□□ -0.07
Shmt1P50431 Gm15376-201ENSMUST00000122258 783 ntBASIC14.62□□□□□ -0.07
Shmt1P50431 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.62□□□□□ -0.07
Shmt1P50431 Gm12091-201ENSMUST00000146791 830 ntBASIC14.62□□□□□ -0.07
Shmt1P50431 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Mir6392-201ENSMUST00000184924 108 ntBASIC14.62□□□□□ -0.07
Shmt1P50431 Gm43438-201ENSMUST00000198133 379 ntBASIC14.62□□□□□ -0.07
Shmt1P50431 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Shmt1P50431 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Shmt1P50431 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.62□□□□□ -0.07
Shmt1P50431 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shmt1P50431 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.61□□□□□ -0.07
Shmt1P50431 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Shmt1P50431 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.61□□□□□ -0.07
Shmt1P50431 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Shmt1P50431 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Shmt1P50431 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Shmt1P50431 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Shmt1P50431 Gm12138-201ENSMUST00000122180 951 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms