Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.93□□□□□ -0.5
Slc6a1P31648 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.93□□□□□ -0.5
Slc6a1P31648 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.93□□□□□ -0.5
Slc6a1P31648 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.93□□□□□ -0.5
Slc6a1P31648 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.93□□□□□ -0.5
Slc6a1P31648 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.93□□□□□ -0.5
Slc6a1P31648 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Slc6a1P31648 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.93□□□□□ -0.5
Slc6a1P31648 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Slc6a1P31648 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Slc6a1P31648 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc6a1P31648 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Slc6a1P31648 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Slc6a1P31648 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.92□□□□□ -0.5
Slc6a1P31648 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Slc6a1P31648 Gm6736-201ENSMUST00000166583 948 ntBASIC11.92□□□□□ -0.5
Slc6a1P31648 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.92□□□□□ -0.5
Slc6a1P31648 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Slc6a1P31648 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc6a1P31648 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Slc6a1P31648 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.91□□□□□ -0.5
Slc6a1P31648 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Slc6a1P31648 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Slc6a1P31648 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Slc6a1P31648 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Slc6a1P31648 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Slc6a1P31648 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.91□□□□□ -0.5
Slc6a1P31648 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.91□□□□□ -0.5
Slc6a1P31648 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.91□□□□□ -0.5
Slc6a1P31648 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Gm5682-201ENSMUST00000173402 505 ntBASIC11.91□□□□□ -0.5
Slc6a1P31648 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Slc6a1P31648 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.91□□□□□ -0.5
Slc6a1P31648 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Slc6a1P31648 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms