Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.82□□□□□ -0.36
Cd40lgP27548 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cd40lgP27548 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.82□□□□□ -0.36
Cd40lgP27548 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cd40lgP27548 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Mir125a-201ENSMUST00000083545 68 ntBASIC12.82□□□□□ -0.36
Cd40lgP27548 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cd40lgP27548 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cd40lgP27548 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd40lgP27548 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cd40lgP27548 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cd40lgP27548 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.81□□□□□ -0.36
Cd40lgP27548 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.81□□□□□ -0.36
Cd40lgP27548 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.81□□□□□ -0.36
Cd40lgP27548 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.81□□□□□ -0.36
Cd40lgP27548 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Gm27989-201ENSMUST00000184721 107 ntBASIC12.81□□□□□ -0.36
Cd40lgP27548 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cd40lgP27548 Gm46209-201ENSMUST00000217912 553 ntBASIC12.81□□□□□ -0.36
Cd40lgP27548 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.81□□□□□ -0.36
Cd40lgP27548 Dupd1-202ENSMUST00000224735 548 ntBASIC12.81□□□□□ -0.36
Cd40lgP27548 Shd-206ENSMUST00000225145 998 ntBASIC12.81□□□□□ -0.36
Cd40lgP27548 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.81□□□□□ -0.36
Cd40lgP27548 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.81□□□□□ -0.36
Cd40lgP27548 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cd40lgP27548 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.81□□□□□ -0.36
Cd40lgP27548 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.81□□□□□ -0.36
Cd40lgP27548 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cd40lgP27548 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd40lgP27548 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.8□□□□□ -0.36
Cd40lgP27548 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cd40lgP27548 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cd40lgP27548 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.8□□□□□ -0.36
Cd40lgP27548 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cd40lgP27548 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cd40lgP27548 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.8□□□□□ -0.36
Cd40lgP27548 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Gm16476-201ENSMUST00000221544 139 ntBASIC12.8□□□□□ -0.36
Cd40lgP27548 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.8□□□□□ -0.36
Cd40lgP27548 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd40lgP27548 Carlr-201ENSMUST00000181515 2574 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms