Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Irf8P23611 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.92□□□□□ -0.02
Irf8P23611 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.92□□□□□ -0.02
Irf8P23611 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.92□□□□□ -0.02
Irf8P23611 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Irf8P23611 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.92□□□□□ -0.02
Irf8P23611 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.92□□□□□ -0.02
Irf8P23611 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.92□□□□□ -0.02
Irf8P23611 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.92□□□□□ -0.02
Irf8P23611 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.92□□□□□ -0.02
Irf8P23611 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.92□□□□□ -0.02
Irf8P23611 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Irf8P23611 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Irf8P23611 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Irf8P23611 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.91□□□□□ -0.02
Irf8P23611 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
Irf8P23611 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Irf8P23611 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.91□□□□□ -0.02
Irf8P23611 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.91□□□□□ -0.02
Irf8P23611 Gm42612-201ENSMUST00000197986 623 ntBASIC14.91□□□□□ -0.02
Irf8P23611 Gm43170-201ENSMUST00000199827 612 ntBASIC14.91□□□□□ -0.02
Irf8P23611 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.91□□□□□ -0.02
Irf8P23611 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Irf8P23611 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.91□□□□□ -0.02
Irf8P23611 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Irf8P23611 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.91□□□□□ -0.02
Irf8P23611 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Irf8P23611 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.9□□□□□ -0.02
Irf8P23611 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Irf8P23611 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.9□□□□□ -0.02
Irf8P23611 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Irf8P23611 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Irf8P23611 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.9□□□□□ -0.02
Irf8P23611 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Irf8P23611 Gm44855-201ENSMUST00000205725 362 ntBASIC14.9□□□□□ -0.02
Irf8P23611 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Irf8P23611 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms