Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6bP23440 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6bP23440 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6bP23440 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6bP23440 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6bP23440 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6bP23440 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6bP23440 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Pde6bP23440 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Pde6bP23440 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6bP23440 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6bP23440 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6bP23440 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6bP23440 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pde6bP23440 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.14■□□□□ 0.01
Pde6bP23440 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pde6bP23440 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.14■□□□□ 0.01
Pde6bP23440 Gm15678-201ENSMUST00000117573 960 ntBASIC15.14■□□□□ 0.01
Pde6bP23440 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.14■□□□□ 0.01
Pde6bP23440 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
Pde6bP23440 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Gm5035-201ENSMUST00000215581 927 ntBASIC15.14■□□□□ 0.01
Pde6bP23440 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.14■□□□□ 0.01
Pde6bP23440 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pde6bP23440 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Pde6bP23440 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pde6bP23440 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pde6bP23440 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pde6bP23440 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6bP23440 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6bP23440 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.13■□□□□ 0.01
Pde6bP23440 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.13■□□□□ 0.01
Pde6bP23440 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pde6bP23440 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6bP23440 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.13■□□□□ 0.01
Pde6bP23440 Mir7085-201ENSMUST00000184353 66 ntBASIC15.13■□□□□ 0.01
Pde6bP23440 Gm37714-201ENSMUST00000194742 342 ntBASIC15.13■□□□□ 0.01
Pde6bP23440 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6bP23440 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6bP23440 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pde6bP23440 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6bP23440 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6bP23440 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6bP23440 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6bP23440 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6bP23440 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6bP23440 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6bP23440 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6bP23440 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6bP23440 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pde6bP23440 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Pde6bP23440 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pde6bP23440 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pde6bP23440 Gm4984-201ENSMUST00000115987 360 ntBASIC15.12■□□□□ 0.01
Pde6bP23440 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pde6bP23440 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Pde6bP23440 Gm18027-201ENSMUST00000218947 619 ntBASIC15.12■□□□□ 0.01
Pde6bP23440 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.12■□□□□ 0.01
Pde6bP23440 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.12■□□□□ 0.01
Pde6bP23440 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pde6bP23440 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6bP23440 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Pde6bP23440 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pde6bP23440 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pde6bP23440 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms