Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prim1P20664 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prim1P20664 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Prim1P20664 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Prim1P20664 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.61■□□□□ 0.41
Prim1P20664 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.61■□□□□ 0.41
Prim1P20664 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.61■□□□□ 0.41
Prim1P20664 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.61■□□□□ 0.41
Prim1P20664 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prim1P20664 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prim1P20664 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prim1P20664 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC17.61■□□□□ 0.41
Prim1P20664 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17.61■□□□□ 0.41
Prim1P20664 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prim1P20664 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Prim1P20664 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.61■□□□□ 0.41
Prim1P20664 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prim1P20664 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prim1P20664 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Prim1P20664 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.6■□□□□ 0.41
Prim1P20664 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.6■□□□□ 0.41
Prim1P20664 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 Gm8652-201ENSMUST00000181363 964 ntBASIC17.6■□□□□ 0.41
Prim1P20664 Gm27839-201ENSMUST00000184242 106 ntBASIC17.6■□□□□ 0.41
Prim1P20664 Gm7287-201ENSMUST00000205267 602 ntBASIC17.6■□□□□ 0.41
Prim1P20664 Gm44719-201ENSMUST00000206404 149 ntBASIC17.6■□□□□ 0.41
Prim1P20664 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.6■□□□□ 0.41
Prim1P20664 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Prim1P20664 Gm5161-201ENSMUST00000075243 853 ntBASIC17.6■□□□□ 0.41
Prim1P20664 Gm24447-201ENSMUST00000083977 338 ntBASIC17.6■□□□□ 0.41
Prim1P20664 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.6■□□□□ 0.41
Prim1P20664 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Prim1P20664 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.6■□□□□ 0.41
Prim1P20664 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prim1P20664 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prim1P20664 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prim1P20664 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prim1P20664 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prim1P20664 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prim1P20664 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prim1P20664 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.59■□□□□ 0.41
Prim1P20664 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prim1P20664 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prim1P20664 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Prim1P20664 Mir1894-201ENSMUST00000122802 81 ntBASIC17.59■□□□□ 0.41
Prim1P20664 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.59■□□□□ 0.41
Prim1P20664 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.59■□□□□ 0.41
Prim1P20664 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.59■□□□□ 0.41
Prim1P20664 Gm6983-201ENSMUST00000214912 628 ntBASIC17.59■□□□□ 0.41
Prim1P20664 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.59■□□□□ 0.41
Prim1P20664 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.59■□□□□ 0.41
Prim1P20664 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Prim1P20664 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prim1P20664 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prim1P20664 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prim1P20664 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prim1P20664 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prim1P20664 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prim1P20664 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Prim1P20664 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prim1P20664 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prim1P20664 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Prim1P20664 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prim1P20664 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prim1P20664 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Prim1P20664 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Prim1P20664 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Prim1P20664 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.58■□□□□ 0.41
Prim1P20664 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Prim1P20664 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prim1P20664 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prim1P20664 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prim1P20664 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prim1P20664 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.58■□□□□ 0.4
Prim1P20664 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prim1P20664 Gm12390-201ENSMUST00000117897 397 ntBASIC17.58■□□□□ 0.4
Prim1P20664 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.58■□□□□ 0.4
Prim1P20664 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prim1P20664 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prim1P20664 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prim1P20664 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.58■□□□□ 0.4
Prim1P20664 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prim1P20664 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prim1P20664 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms