Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cntn1P12960 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cntn1P12960 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cntn1P12960 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cntn1P12960 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cntn1P12960 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cntn1P12960 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cntn1P12960 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cntn1P12960 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cntn1P12960 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cntn1P12960 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cntn1P12960 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cntn1P12960 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.29□□□□□ -0.28
Cntn1P12960 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cntn1P12960 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Gm6912-201ENSMUST00000117218 544 ntBASIC13.29□□□□□ -0.28
Cntn1P12960 Gm15240-201ENSMUST00000118156 720 ntBASIC13.29□□□□□ -0.28
Cntn1P12960 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.29□□□□□ -0.28
Cntn1P12960 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Gm13385-201ENSMUST00000121089 220 ntBASIC13.29□□□□□ -0.28
Cntn1P12960 Gm8584-201ENSMUST00000171982 758 ntBASIC13.29□□□□□ -0.28
Cntn1P12960 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.29□□□□□ -0.28
Cntn1P12960 Gm8927-201ENSMUST00000181978 981 ntBASIC13.29□□□□□ -0.28
Cntn1P12960 Gm5354-201ENSMUST00000182417 973 ntBASIC13.29□□□□□ -0.28
Cntn1P12960 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.29□□□□□ -0.28
Cntn1P12960 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Gm3222-201ENSMUST00000071282 990 ntBASIC13.29□□□□□ -0.28
Cntn1P12960 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Cntn1P12960 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Cntn1P12960 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.29□□□□□ -0.28
Cntn1P12960 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.29□□□□□ -0.28
Cntn1P12960 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cntn1P12960 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
Cntn1P12960 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.29□□□□□ -0.28
Cntn1P12960 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cntn1P12960 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.28□□□□□ -0.28
Cntn1P12960 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Cntn1P12960 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.28□□□□□ -0.28
Cntn1P12960 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.28□□□□□ -0.28
Cntn1P12960 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cntn1P12960 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cntn1P12960 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cntn1P12960 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cntn1P12960 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.28□□□□□ -0.28
Cntn1P12960 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.28□□□□□ -0.28
Cntn1P12960 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.28□□□□□ -0.28
Cntn1P12960 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.28□□□□□ -0.28
Cntn1P12960 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.28□□□□□ -0.28
Cntn1P12960 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Gm18905-201ENSMUST00000205454 928 ntBASIC13.28□□□□□ -0.28
Cntn1P12960 Gm9908-201ENSMUST00000211534 448 ntBASIC13.28□□□□□ -0.28
Cntn1P12960 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.28□□□□□ -0.28
Cntn1P12960 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.28□□□□□ -0.28
Cntn1P12960 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.28□□□□□ -0.28
Cntn1P12960 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Cntn1P12960 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.28□□□□□ -0.28
Cntn1P12960 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cntn1P12960 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.27□□□□□ -0.28
Cntn1P12960 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms