Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC9.5□□□□□ -0.89
Smim1P0C8K7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Smim1P0C8K7 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Gm44851-201ENSMUST00000205735 2309 ntBASIC9.49□□□□□ -0.89
Smim1P0C8K7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC9.49□□□□□ -0.89
Smim1P0C8K7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Gm43799-201ENSMUST00000201845 579 ntBASIC9.49□□□□□ -0.89
Smim1P0C8K7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 AC134329.2-201ENSMUST00000217897 428 ntBASIC9.49□□□□□ -0.89
Smim1P0C8K7 Gm8655-201ENSMUST00000221159 852 ntBASIC9.49□□□□□ -0.89
Smim1P0C8K7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
Smim1P0C8K7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smim1P0C8K7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC9.48□□□□□ -0.89
Smim1P0C8K7 Gm13436-201ENSMUST00000120418 567 ntBASIC9.48□□□□□ -0.89
Smim1P0C8K7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Gm37230-201ENSMUST00000194491 818 ntBASIC9.48□□□□□ -0.89
Smim1P0C8K7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smim1P0C8K7 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.48□□□□□ -0.89
Smim1P0C8K7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms