Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Cx3cl1O35188 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.04□□□□□ -0.32
Cx3cl1O35188 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cx3cl1O35188 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.03□□□□□ -0.32
Cx3cl1O35188 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.03□□□□□ -0.32
Cx3cl1O35188 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.03□□□□□ -0.32
Cx3cl1O35188 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.03□□□□□ -0.32
Cx3cl1O35188 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.03□□□□□ -0.32
Cx3cl1O35188 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.03□□□□□ -0.32
Cx3cl1O35188 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
Cx3cl1O35188 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cx3cl1O35188 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.02□□□□□ -0.32
Cx3cl1O35188 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cx3cl1O35188 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cx3cl1O35188 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cx3cl1O35188 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cx3cl1O35188 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms