Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ebf3O08791 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Ebf3O08791 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 Gm4804-201ENSMUST00000182234 999 ntBASIC14.4□□□□□ -0.1
Ebf3O08791 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.4□□□□□ -0.1
Ebf3O08791 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Ebf3O08791 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ebf3O08791 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ebf3O08791 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Ebf3O08791 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ebf3O08791 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf3O08791 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf3O08791 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf3O08791 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Ebf3O08791 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf3O08791 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf3O08791 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf3O08791 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ebf3O08791 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.39□□□□□ -0.11
Ebf3O08791 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.39□□□□□ -0.11
Ebf3O08791 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.39□□□□□ -0.11
Ebf3O08791 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.39□□□□□ -0.11
Ebf3O08791 Mir7654-201ENSMUST00000185082 70 ntBASIC14.39□□□□□ -0.11
Ebf3O08791 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf3O08791 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.39□□□□□ -0.11
Ebf3O08791 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.39□□□□□ -0.11
Ebf3O08791 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf3O08791 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf3O08791 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf3O08791 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf3O08791 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Ebf3O08791 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf3O08791 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf3O08791 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ebf3O08791 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf3O08791 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ebf3O08791 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf3O08791 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf3O08791 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf3O08791 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ebf3O08791 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.38□□□□□ -0.11
Ebf3O08791 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf3O08791 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf3O08791 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf3O08791 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf3O08791 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf3O08791 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.38□□□□□ -0.11
Ebf3O08791 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf3O08791 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf3O08791 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ebf3O08791 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ebf3O08791 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ebf3O08791 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.38□□□□□ -0.11
Ebf3O08791 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ebf3O08791 Gm18307-201ENSMUST00000206864 949 ntBASIC14.38□□□□□ -0.11
Ebf3O08791 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf3O08791 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.38□□□□□ -0.11
Ebf3O08791 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf3O08791 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ebf3O08791 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ebf3O08791 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ebf3O08791 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.38□□□□□ -0.11
Ebf3O08791 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.38□□□□□ -0.11
Ebf3O08791 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.38□□□□□ -0.11
Ebf3O08791 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf3O08791 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.37□□□□□ -0.11
Ebf3O08791 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Ebf3O08791 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ebf3O08791 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.37□□□□□ -0.11
Ebf3O08791 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ebf3O08791 Gm4984-201ENSMUST00000115987 360 ntBASIC14.37□□□□□ -0.11
Ebf3O08791 Gm11425-201ENSMUST00000119608 498 ntBASIC14.37□□□□□ -0.11
Ebf3O08791 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ebf3O08791 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.37□□□□□ -0.11
Ebf3O08791 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms