Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shisa8J3QNX5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.63□□□□□ -0.39
Shisa8J3QNX5 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Gm12882-201ENSMUST00000121696 517 ntBASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Gm17971-201ENSMUST00000190239 806 ntBASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shisa8J3QNX5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Shisa8J3QNX5 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms