Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim55G3X8Y1 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.21□□□□□ -0.13
Trim55G3X8Y1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.21□□□□□ -0.13
Trim55G3X8Y1 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim55G3X8Y1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim55G3X8Y1 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim55G3X8Y1 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trim55G3X8Y1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim55G3X8Y1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim55G3X8Y1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms