Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Dupd1-202ENSMUST00000224735 548 ntBASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh9F8VPK8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh9F8VPK8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh9F8VPK8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh9F8VPK8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh9F8VPK8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Pcdh9F8VPK8 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh9F8VPK8 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh9F8VPK8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Pcdh9F8VPK8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh9F8VPK8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.21□□□□□ -0.14
Pcdh9F8VPK8 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Pcdh9F8VPK8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm22065-201ENSMUST00000103753 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm22066-201ENSMUST00000103761 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm24932-201ENSMUST00000103763 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm24115-201ENSMUST00000103799 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm22190-201ENSMUST00000103827 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm22191-201ENSMUST00000103831 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm24721-201ENSMUST00000103849 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm28018-201ENSMUST00000103869 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm26399-201ENSMUST00000103937 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm25349-201ENSMUST00000177728 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm23616-201ENSMUST00000177797 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm25871-201ENSMUST00000177816 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm24752-201ENSMUST00000178240 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm24496-201ENSMUST00000178287 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm25649-201ENSMUST00000178476 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm25548-201ENSMUST00000178681 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm23147-201ENSMUST00000178841 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm26095-201ENSMUST00000179270 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm22171-201ENSMUST00000179283 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm23936-201ENSMUST00000179354 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm22619-201ENSMUST00000179516 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm25255-201ENSMUST00000179579 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm24755-201ENSMUST00000179691 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm26506-201ENSMUST00000179692 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm25086-201ENSMUST00000179931 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm23243-201ENSMUST00000180047 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm24659-201ENSMUST00000180212 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm24169-201ENSMUST00000180244 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm23689-201ENSMUST00000180354 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm27359-201ENSMUST00000184153 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm27785-201ENSMUST00000184268 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm27466-201ENSMUST00000184396 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm27703-201ENSMUST00000184836 110 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gm18041-201ENSMUST00000218210 618 ntBASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms