Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.56■□□□□ 0.24
Ube4aE9Q735 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.56■□□□□ 0.24
Ube4aE9Q735 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ube4aE9Q735 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Gm17420-201ENSMUST00000164753 153 ntBASIC16.55■□□□□ 0.24
Ube4aE9Q735 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Ube4aE9Q735 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Gm42693-201ENSMUST00000196779 631 ntBASIC16.55■□□□□ 0.24
Ube4aE9Q735 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Gm29705-201ENSMUST00000212598 474 ntBASIC16.55■□□□□ 0.24
Ube4aE9Q735 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ube4aE9Q735 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.55■□□□□ 0.24
Ube4aE9Q735 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4aE9Q735 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Gm23931-201ENSMUST00000103842 109 ntBASIC16.54■□□□□ 0.24
Ube4aE9Q735 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.54■□□□□ 0.24
Ube4aE9Q735 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4aE9Q735 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ube4aE9Q735 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.53■□□□□ 0.24
Ube4aE9Q735 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.53■□□□□ 0.24
Ube4aE9Q735 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.53■□□□□ 0.24
Ube4aE9Q735 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Ube4aE9Q735 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Gm27514-201ENSMUST00000183692 110 ntBASIC16.53■□□□□ 0.24
Ube4aE9Q735 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ube4aE9Q735 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms