Protein–RNA interactions for Protein: B2RV38

Rd3l, BC048943 protein, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3lB2RV38 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rd3lB2RV38 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.11□□□□□ -0.47
Rd3lB2RV38 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Rd3lB2RV38 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Gm45098-201ENSMUST00000207179 657 ntBASIC12.11□□□□□ -0.47
Rd3lB2RV38 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.11□□□□□ -0.47
Rd3lB2RV38 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.11□□□□□ -0.47
Rd3lB2RV38 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.11□□□□□ -0.47
Rd3lB2RV38 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.1□□□□□ -0.47
Rd3lB2RV38 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Gm17271-201ENSMUST00000165535 355 ntBASIC12.1□□□□□ -0.47
Rd3lB2RV38 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.1□□□□□ -0.47
Rd3lB2RV38 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.1□□□□□ -0.47
Rd3lB2RV38 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rd3lB2RV38 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.09□□□□□ -0.47
Rd3lB2RV38 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.09□□□□□ -0.47
Rd3lB2RV38 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.09□□□□□ -0.47
Rd3lB2RV38 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.09□□□□□ -0.47
Rd3lB2RV38 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.09□□□□□ -0.47
Rd3lB2RV38 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.09□□□□□ -0.47
Rd3lB2RV38 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.09□□□□□ -0.47
Rd3lB2RV38 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.09□□□□□ -0.47
Rd3lB2RV38 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rd3lB2RV38 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.09□□□□□ -0.47
Rd3lB2RV38 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.09□□□□□ -0.47
Rd3lB2RV38 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms