Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.69□□□□□ -0.54
Col6a4A2AX52 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.69□□□□□ -0.54
Col6a4A2AX52 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Gm21470-201ENSMUST00000187680 696 ntBASIC11.69□□□□□ -0.54
Col6a4A2AX52 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.69□□□□□ -0.54
Col6a4A2AX52 Gm43818-201ENSMUST00000200605 466 ntBASIC11.69□□□□□ -0.54
Col6a4A2AX52 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.69□□□□□ -0.54
Col6a4A2AX52 Gm7783-201ENSMUST00000204795 781 ntBASIC11.69□□□□□ -0.54
Col6a4A2AX52 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.69□□□□□ -0.54
Col6a4A2AX52 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.68□□□□□ -0.54
Col6a4A2AX52 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.68□□□□□ -0.54
Col6a4A2AX52 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.68□□□□□ -0.54
Col6a4A2AX52 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.68□□□□□ -0.54
Col6a4A2AX52 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Gm38671-201ENSMUST00000200573 130 ntBASIC11.68□□□□□ -0.54
Col6a4A2AX52 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a4A2AX52 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Mir7070-201ENSMUST00000183657 86 ntBASIC11.67□□□□□ -0.54
Col6a4A2AX52 Gm38002-201ENSMUST00000193255 180 ntBASIC11.67□□□□□ -0.54
Col6a4A2AX52 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a4A2AX52 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.66□□□□□ -0.54
Col6a4A2AX52 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.66□□□□□ -0.54
Col6a4A2AX52 Gm38341-201ENSMUST00000195357 515 ntBASIC11.66□□□□□ -0.54
Col6a4A2AX52 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms