Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc112A0AUP1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc112A0AUP1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc112A0AUP1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc112A0AUP1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc112A0AUP1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.83■□□□□ 0.13
Ccdc112A0AUP1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Ccdc112A0AUP1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc112A0AUP1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc112A0AUP1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc112A0AUP1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Gm4995-201ENSMUST00000117247 432 ntBASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Mir6990-201ENSMUST00000183724 91 ntBASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Gm8000-201ENSMUST00000188378 592 ntBASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.83■□□□□ 0.12
Ccdc112A0AUP1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Gm25925-201ENSMUST00000158314 306 ntBASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Gm6443-201ENSMUST00000203599 874 ntBASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Gm44719-201ENSMUST00000206404 149 ntBASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc112A0AUP1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Gm43125-201ENSMUST00000201724 730 ntBASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Gm44771-201ENSMUST00000206975 626 ntBASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms