Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Gm44719-201ENSMUST00000206404 149 ntBASIC13.54□□□□□ -0.24
Cdh17Q9R100 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.54□□□□□ -0.24
Cdh17Q9R100 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh17Q9R100 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh17Q9R100 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.53□□□□□ -0.24
Cdh17Q9R100 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Gm6916-202ENSMUST00000205523 195 ntBASIC13.53□□□□□ -0.24
Cdh17Q9R100 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Mir497b-201ENSMUST00000093601 125 ntBASIC13.53□□□□□ -0.24
Cdh17Q9R100 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cdh17Q9R100 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.52□□□□□ -0.24
Cdh17Q9R100 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh17Q9R100 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Cdh17Q9R100 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh17Q9R100 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh17Q9R100 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Cdh17Q9R100 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh17Q9R100 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh17Q9R100 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh17Q9R100 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh17Q9R100 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh17Q9R100 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Cdh17Q9R100 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh17Q9R100 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh17Q9R100 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cdh17Q9R100 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.52□□□□□ -0.25
Cdh17Q9R100 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh17Q9R100 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.52□□□□□ -0.25
Cdh17Q9R100 Gm25925-201ENSMUST00000158314 306 ntBASIC13.52□□□□□ -0.25
Cdh17Q9R100 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cdh17Q9R100 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.52□□□□□ -0.25
Cdh17Q9R100 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.52□□□□□ -0.25
Cdh17Q9R100 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.52□□□□□ -0.25
Cdh17Q9R100 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh17Q9R100 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh17Q9R100 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh17Q9R100 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh17Q9R100 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh17Q9R100 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh17Q9R100 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh17Q9R100 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh17Q9R100 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cdh17Q9R100 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms