Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf4Q9QZS2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf4Q9QZS2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rnf4Q9QZS2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf4Q9QZS2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Rnf4Q9QZS2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf4Q9QZS2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.02□□□□□ -0.16
Rnf4Q9QZS2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf4Q9QZS2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf4Q9QZS2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Gm45167-201ENSMUST00000208007 322 ntBASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf4Q9QZS2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Gm5479-201ENSMUST00000160578 435 ntBASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Gm2272-201ENSMUST00000194903 582 ntBASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf4Q9QZS2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf4Q9QZS2 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.99□□□□□ -0.17
Rnf4Q9QZS2 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.99□□□□□ -0.17
Rnf4Q9QZS2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf4Q9QZS2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Rnf4Q9QZS2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf4Q9QZS2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf4Q9QZS2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rnf4Q9QZS2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rnf4Q9QZS2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms