Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Gm17971-201ENSMUST00000190239 806 ntBASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Gm37153-201ENSMUST00000193637 231 ntBASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Gm7153-201ENSMUST00000117092 455 ntBASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Gm9726-201ENSMUST00000180321 678 ntBASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Gm10819-201ENSMUST00000099988 561 ntBASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ube4bQ9ES00 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Gm7230-201ENSMUST00000173026 815 ntBASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ube4bQ9ES00 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ube4bQ9ES00 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms