Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rrp8Q9DB85 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.55□□□□□ -0.24
Rrp8Q9DB85 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Gm12384-201ENSMUST00000119228 919 ntBASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Gm27572-201ENSMUST00000183702 255 ntBASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Gm5370-201ENSMUST00000187187 574 ntBASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Gm29741-201ENSMUST00000192667 421 ntBASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.55□□□□□ -0.24
Rrp8Q9DB85 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Gm10012-201ENSMUST00000078252 192 ntBASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Rrp8Q9DB85 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Mir698-201ENSMUST00000102164 109 ntBASIC13.54□□□□□ -0.24
Rrp8Q9DB85 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Gm24196-201ENSMUST00000179161 110 ntBASIC13.54□□□□□ -0.24
Rrp8Q9DB85 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rrp8Q9DB85 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Mir1247-201ENSMUST00000116706 82 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms