Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
U2af1Q9D883 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
U2af1Q9D883 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
U2af1Q9D883 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
U2af1Q9D883 Gm45760-201ENSMUST00000212190 1782 ntBASIC18.23■□□□□ 0.51
U2af1Q9D883 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
U2af1Q9D883 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
U2af1Q9D883 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
U2af1Q9D883 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
U2af1Q9D883 Gm12091-201ENSMUST00000146791 830 ntBASIC18.23■□□□□ 0.51
U2af1Q9D883 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.23■□□□□ 0.51
U2af1Q9D883 Gm2445-201ENSMUST00000182798 989 ntBASIC18.23■□□□□ 0.51
U2af1Q9D883 Gm43094-201ENSMUST00000196549 921 ntBASIC18.23■□□□□ 0.51
U2af1Q9D883 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.23■□□□□ 0.51
U2af1Q9D883 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
U2af1Q9D883 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
U2af1Q9D883 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
U2af1Q9D883 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
U2af1Q9D883 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
U2af1Q9D883 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
U2af1Q9D883 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
U2af1Q9D883 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
U2af1Q9D883 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
U2af1Q9D883 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
U2af1Q9D883 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
U2af1Q9D883 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
U2af1Q9D883 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
U2af1Q9D883 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
U2af1Q9D883 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC18.22■□□□□ 0.51
U2af1Q9D883 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
U2af1Q9D883 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
U2af1Q9D883 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
U2af1Q9D883 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
U2af1Q9D883 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
U2af1Q9D883 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
U2af1Q9D883 Gm8515-201ENSMUST00000194852 576 ntBASIC18.22■□□□□ 0.51
U2af1Q9D883 AC155286.1-201ENSMUST00000218632 448 ntBASIC18.22■□□□□ 0.51
U2af1Q9D883 AC140375.2-201ENSMUST00000225283 584 ntBASIC18.22■□□□□ 0.51
U2af1Q9D883 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
U2af1Q9D883 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
U2af1Q9D883 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
U2af1Q9D883 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
U2af1Q9D883 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
U2af1Q9D883 Gm37015-201ENSMUST00000192763 1521 ntBASIC18.22■□□□□ 0.51
U2af1Q9D883 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
U2af1Q9D883 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
U2af1Q9D883 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
U2af1Q9D883 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
U2af1Q9D883 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
U2af1Q9D883 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
U2af1Q9D883 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
U2af1Q9D883 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
U2af1Q9D883 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
U2af1Q9D883 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
U2af1Q9D883 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
U2af1Q9D883 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
U2af1Q9D883 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
U2af1Q9D883 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
U2af1Q9D883 Gm12490-201ENSMUST00000120255 560 ntBASIC18.21■□□□□ 0.51
U2af1Q9D883 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC18.21■□□□□ 0.51
U2af1Q9D883 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.21■□□□□ 0.51
U2af1Q9D883 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC18.21■□□□□ 0.51
U2af1Q9D883 Gm9908-201ENSMUST00000211534 448 ntBASIC18.21■□□□□ 0.51
U2af1Q9D883 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
U2af1Q9D883 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
U2af1Q9D883 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
U2af1Q9D883 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
U2af1Q9D883 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
U2af1Q9D883 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
U2af1Q9D883 Gm43056-201ENSMUST00000197865 2791 ntBASIC18.21■□□□□ 0.51
U2af1Q9D883 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
U2af1Q9D883 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
U2af1Q9D883 Gm8337-201ENSMUST00000187358 1938 ntBASIC18.21■□□□□ 0.51
U2af1Q9D883 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
U2af1Q9D883 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
U2af1Q9D883 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC18.21■□□□□ 0.51
U2af1Q9D883 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
U2af1Q9D883 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
U2af1Q9D883 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
U2af1Q9D883 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC18.21■□□□□ 0.5
U2af1Q9D883 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
U2af1Q9D883 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
U2af1Q9D883 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
U2af1Q9D883 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC18.2■□□□□ 0.5
U2af1Q9D883 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
U2af1Q9D883 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
U2af1Q9D883 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
U2af1Q9D883 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
U2af1Q9D883 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.2■□□□□ 0.5
U2af1Q9D883 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
U2af1Q9D883 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC18.2■□□□□ 0.5
U2af1Q9D883 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
U2af1Q9D883 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
U2af1Q9D883 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
U2af1Q9D883 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
U2af1Q9D883 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
U2af1Q9D883 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
U2af1Q9D883 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
U2af1Q9D883 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
U2af1Q9D883 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms