Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nop56Q9D6Z1 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nop56Q9D6Z1 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nop56Q9D6Z1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nop56Q9D6Z1 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nop56Q9D6Z1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nop56Q9D6Z1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Nop56Q9D6Z1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nop56Q9D6Z1 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nop56Q9D6Z1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Mir8098-201ENSMUST00000184011 137 ntBASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Gm27628-201ENSMUST00000184911 107 ntBASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nop56Q9D6Z1 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nop56Q9D6Z1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms